R Use Apply Family to Read in Many Csv Files

File format used to store information

Comma-separated values

Filename extension	.csv
Cyberspace media blazon	text/csv [1]
Type of format	multi-platform, serial information streams
Container for	database information organized as field separated lists
Standard	RFC 4180

A comma-separated values (CSV) file is a delimited text file that uses a comma to divide values. Each line of the file is a data record. Each record consists of i or more fields, separated by commas. The employ of the comma as a field separator is the source of the name for this file format. A CSV file typically stores tabular data (numbers and text) in plain text, in which case each line will have the same number of fields.

The CSV file format is non fully standardized. Separating fields with commas is the foundation, but commas in the data or embedded line breaks have to be handled specially. Some implementations disallow such content while others environs the field with quotation marks, which nonetheless again creates the need for escaping if quotation marks are present in the data.

The term "CSV" also denotes several closely-related delimiter-separated formats that employ other field delimiters such as semicolons.^[2] These include tab-separated values and space-separated values. A delimiter guaranteed non to exist function of the data greatly simplifies parsing.

Alternative delimiter-separated files are oftentimes given a ".csv" extension despite the use of a not-comma field separator. This loose terminology can cause problems in data exchange. Many applications that accept CSV files accept options to select the delimiter character and the quotation character. Semicolons are oftentimes used instead of commas in many European locales in order to utilize the comma as the decimal separator and, possibly, the period every bit a decimal group character.

Data substitution [edit]

CSV is a common data exchange format that is widely supported by consumer, business, and scientific applications. Among its virtually common uses is moving tabular data^{[3] [four]} between programs that natively operate on incompatible (often proprietary or undocumented) formats.^[one] This works despite lack of adherence to RFC 4180 (or any other standard), because then many programs support variations on the CSV format for information import.

For instance, a user may demand to transfer data from a database program that stores information in a proprietary format, to a spreadsheet that uses a completely different format. Most database programs can export data as CSV and the exported CSV file tin then be imported by the spreadsheet programme.

Specification [edit]

RFC 4180 proposes a specification for the CSV format; even so, bodily practice often does non follow the RFC and the term "CSV" might refer to any file that:^{[1] [five]}

1. is obviously text using a character encoding such as ASCII, diverse Unicode character encodings (due east.g. UTF-8), EBCDIC, or Shift JIS,
2. consists of records (typically 1 record per line),
3. with the records divided into fields separated by delimiters (typically a unmarried reserved character such equally comma, semicolon, or tab; sometimes the delimiter may include optional spaces),
4. where every record has the same sequence of fields.

Inside these general constraints, many variations are in utilize. Therefore, without additional data (such as whether RFC 4180 is honored), a file claimed simply to be in "CSV" format is not fully specified. Equally a consequence, some applications supporting CSV files let users to preview the first few lines of the file and and so specify the delimiter character(s), quoting rules, etc.; for example, Microsoft Excel's Text Import Sorcerer.

History [edit]

Comma-separated values is a data format that predates personal computers past more than than a decade: the IBM Fortran (level H extended) compiler under OS/360 supported CSV in 1972.^[six] List-directed ("free class") input/output was defined in FORTRAN 77, approved in 1978. Listing-directed input used commas or spaces for delimiters, so unquoted grapheme strings could not contain commas or spaces.^[seven]

The term "comma-separated value" and the "CSV" abridgement were in utilize by 1983.^[8] The transmission for the Osborne Executive computer, which bundled the SuperCalc spreadsheet, documents the CSV quoting convention that allows strings to contain embedded commas, but the manual does not specify a convention for embedding quotation marks within quoted strings.^[ix]

Comma-separated value lists are easier to type (for example into punched cards) than stock-still-column-aligned data, and they were less prone to producing incorrect results if a value was punched one column off from its intended location.

Comma separated files are used for the interchange of database information between machines of two different architectures. The plain-text graphic symbol of CSV files largely avoids incompatibilities such as byte-order and word size. The files are largely human-readable, and so it is easier to bargain with them in the absenteeism of perfect documentation or communication.^[10]

The main standardization initiative—transforming "de facto fuzzy definition" into a more precise and de jure one—was in 2005, with RFC 4180, defining CSV as a MIME Content Blazon.^[eleven] Later, in 2013, some of RFC 4180'due south deficiencies were tackled by a W3C recommendation.^[12]

In 2014 IETF published RFC 7111 describing application of URI fragments to CSV documents. RFC 7111 specifies how row, cavalcade, and cell ranges can be selected from a CSV document using position indexes.^[13]

In 2015 W3C, in an endeavour to enhance CSV with formal semantics, publicized the first drafts of recommendations for CSV-metadata standards, that began as recommendations in Dec of the same year.^[fourteen]

General functionality [edit]

CSV formats are best used to correspond sets or sequences of records in which each record has an identical list of fields. This corresponds to a single relation in a relational database, or to data (though non calculations) in a typical spreadsheet.

The format dates back to the early days of business concern computing and is widely used to pass data between computers with different internal discussion sizes, data formatting needs, and so forth. For this reason, CSV files are common on all computer platforms.

CSV is a delimited text file that uses a comma to separate values (many implementations of CSV import/export tools permit other separators to exist used; for case, the utilise of a "Sep=^" row as the first row in the *.csv file will crusade Excel to open the file expecting caret "^" to be the separator instead of comma ","). Simple CSV implementations may prohibit field values that contain a comma or other special characters such as newlines. More than sophisticated CSV implementations allow them, often by requiring " (double quote) characters around values that comprise reserved characters (such as commas, double quotes, or less ordinarily, newlines). Embedded double quote characters may then be represented by a pair of consecutive double quotes,^[15] or by prefixing a double quote with an escape character such as a backslash (for example in Sybase Primal).

CSV formats are not limited to a detail graphic symbol prepare.^[1] They work just also with Unicode character sets (such as UTF-8 or UTF-xvi) equally with ASCII (although item programs that support CSV may have their own limitations). CSV files commonly will fifty-fifty survive naive translation from one character set to some other (dissimilar about all proprietary information formats). CSV does not, all the same, provide any mode to indicate what character set is in apply, so that must exist communicated separately, or determined at the receiving end (if possible).

Databases that include multiple relations cannot be exported as a unmarried CSV file^{[ citation needed ]}. Similarly, CSV cannot naturally stand for hierarchical or object-oriented data. This is because every CSV record is expected to have the aforementioned structure. CSV is therefore rarely appropriate for documents created with HTML, XML, or other markup or discussion-processing technologies.

Statistical databases in various fields often accept a generally relation-like structure, only with some repeatable groups of fields. For example, health databases such as the Demographic and Wellness Survey typically echo some questions for each child of a given parent (peradventure upwards to a fixed maximum number of children). Statistical analysis systems often include utilities that can "rotate" such data; for example, a "parent" record that includes information about five children can be divide into five carve up records, each containing (a) the information on one child, and (b) a copy of all the non-child-specific information. CSV tin represent either the "vertical" or "horizontal" grade of such data.

In a relational database, like issues are readily handled past creating a carve up relation for each such grouping, and connecting "child" records to the related "parent" records using a foreign fundamental (such as an ID number or proper name for the parent). In markup languages such as XML, such groups are typically enclosed within a parent element and repeated as necessary (for example, multiple <child> nodes inside a single <parent> node). With CSV there is no widely accepted single-file solution.

Standardization [edit]

The name "CSV" indicates the apply of the comma to split up data fields. Yet, the term "CSV" is widely used to refer to a large family of formats that differ in many ways. Some implementations allow or require single or double quotation marks around some or all fields; and some reserve the commencement record as a header containing a list of field names. The character set being used is undefined: some applications require a Unicode byte order mark (BOM) to enforce Unicode interpretation (sometimes fifty-fifty a UTF-8 BOM).^[1] Files that use the tab character instead of comma can exist more precisely referred to as "TSV" for tab-separated values.

Other implementation differences include handling of more commonplace field separators (such as infinite or semicolon) and newline characters inside text fields. One more subtlety is the interpretation of a blank line: it tin equally be the result of writing a record of zero fields, or a record of one field of zero length; thus decoding it is cryptic.

RFC 4180 and MIME standards [edit]

The 2005 technical standard RFC 4180 formalizes the CSV file format and defines the MIME type "text/csv" for handling of text-based fields. However, estimation of the text of each field is still application-specific. Files that follow the RFC 4180 standard can simplify CSV substitution and should be widely portable. Amidst its requirements:

• MS-DOS-style lines that end with (CR/LF) characters (optional for the last line).
• An optional header record (there is no sure way to discover whether information technology is present, and then care is required when importing).
• Each record should incorporate the same number of comma-separated fields.
• Whatever field may be quoted (with double quotes).
• Fields containing a line-pause, double-quote or commas should be quoted. (If they are not, the file will probable be impossible to process correctly.)
• If double-quotes are used to enclose fields, then a double-quote in a field must be represented by two double-quote characters.

The format can be processed by most programs that merits to read CSV files. The exceptions are (a) programs may not support line-breaks within quoted fields, (b) programs may confuse the optional header with data or interpret the showtime data line every bit an optional header and (c) double quotes in a field may not exist parsed correctly automatically.

OKF frictionless tabular data package [edit]

In 2011 Open Noesis Foundation (OKF) and diverse partners created a data protocols working group, which later evolved into the Frictionless Data initiative. One of the chief formats they released was the Tabular Data Parcel. Tabular Data bundle was heavily based on CSV, using it as the main data transport format and adding basic type and schema metadata (CSV lacks any blazon information to distinguish the string "1" from the number ane).^[16]

The Frictionless Data Initiative has also provided a standard CSV Dialect Description Format for describing different dialects of CSV, for instance specifying the field separator or quoting rules.^[17]

W3C tabular data standard [edit]

In 2013 the W3C "CSV on the Web" working grouping began to specify technologies providing a higher interoperability for web applications using CSV or similar formats.^[18] The working grouping completed its work in Feb 2016, and is officially closed in March 2016 with the release of a set of documents and W3C recommendations^[19] for modeling "Tabular Information",^[xx] and enhancing CSV with metadata and semantics.

Basic rules [edit]

Many breezy documents exist that describe "CSV" formats. IETF RFC 4180 (summarized higher up) defines the format for the "text/csv" MIME type registered with the IANA.

Rules typical of these and other "CSV" specifications and implementations are as follows:

• CSV is a delimited data format that has fields/columns separated past the comma character and records/rows terminated by newlines.
• A CSV file does not require a specific character encoding, byte order, or line terminator format (some software practice not support all line-end variations).
• A record ends at a line terminator. However, line-terminators can be embedded as information within fields, so software must recognize quoted line-separators (run into below) in order to correctly get together an entire tape from maybe multiple lines.
• All records should have the same number of fields, in the same society.
• Data within fields is interpreted equally a sequence of characters, not as a sequence of $.25 or bytes (meet RFC 2046, section 4.one). For example, the numeric quantity 65535 may exist represented as the 5 ASCII characters "65535" (or mayhap other forms such equally "0xFFFF", "000065535.000E+00", etc.); but non as a sequence of ii bytes intended to exist treated as a single binary integer rather than every bit two characters (e.thou. the numbers 11264–11519 have a comma as their loftier social club byte: ord ( ',' ) * 256 .. ord ( ',' ) * 256 + 255 ). If this "plain text" convention is not followed, then the CSV file no longer contains sufficient information to interpret it correctly, the CSV file will not probable survive transmission beyond differing computer architectures, and will not conform to the text/csv MIME type.
• Adjacent fields must be separated by a unmarried comma. Notwithstanding, "CSV" formats vary profoundly in this choice of separator character. In particular, in locales where the comma is used equally a decimal separator, a semicolon, TAB, or other character is used instead.

  1997,Ford,E350

• Any field may be quoted (that is, enclosed within double-quote characters), while some fields must be quoted, equally specified in the following rules and examples:

  "1997","Ford","E350"

• Fields with embedded commas or double-quote characters must be quoted.

  1997,Ford,E350,"Super, luxurious truck"

• Each of the embedded double-quote characters must be represented by a pair of double-quote characters.

  1997,Ford,E350,"Super, ""luxurious"" truck"

• Fields with embedded line breaks must exist quoted (however, many CSV implementations do not support embedded line breaks).

  1997,Ford,E350,"Go become one now they are going fast"              

• In some CSV implementations^{[ which? ]}, leading and trailing spaces and tabs are trimmed (ignored). Such trimming is forbidden by RFC 4180, which states "Spaces are considered part of a field and should not be ignored."

  1997, Ford, E350 not aforementioned as 1997,Ford,E350              

• Co-ordinate to RFC 4180, spaces outside quotes in a field are not immune; nonetheless, the RFC too says that "Spaces are considered part of a field and should non exist ignored." and "Implementers should 'be bourgeois in what y'all do, exist liberal in what you have from others' (RFC 793, department 2.ten) when processing CSV files."

  1997, "Ford" ,E350

• In CSV implementations that exercise trim leading or abaft spaces, fields with such spaces as meaningful data must be quoted.

  1997,Ford,E350," Super luxurious truck "

• Double quote processing need but use if the field starts with a double quote. Note, however, that double quotes are non allowed in unquoted fields co-ordinate to RFC 4180.

  Los Angeles,34°03′N,118°15′W New York City,40°42′46″Northward,74°00′21″W Paris,48°51′24″N,ii°21′03″Eastward              

• The first tape may be a "header", which contains column names in each of the fields (there is no reliable way to tell whether a file does this or not; however, it is uncommon to use characters other than messages, digits, and underscores in such column names).

  Twelvemonth,Brand,Model 1997,Ford,E350 2000,Mercury,Cougar              

Case [edit]

Year	Make	Model	Description	Cost
1997	Ford	E350	ac, abs, moon	3000.00
1999	Chevy	Venture "Extended Edition"		4900.00
1999	Chevy	Venture "Extended Edition, Very Large"		5000.00
1996	Jeep	Chiliad Cherokee	MUST SELL! air, moon roof, loaded	4799.00

The in a higher place table of data may be represented in CSV format as follows:

Yr,Make,Model,Description,Price 1997,Ford,E350,"ac, abs, moon",3000.00 1999,Chevy,"Venture ""Extended Edition""","",4900.00 1999,Chevy,"Venture ""Extended Edition, Very Large""",,5000.00 1996,Jeep,Grand Cherokee,"MUST SELL! air, moon roof, loaded",4799.00        

Example of a USA/UK CSV file (where the decimal separator is a menstruum/full stop and the value separator is a comma):

Twelvemonth,Make,Model,Length 1997,Ford,E350,two.35 2000,Mercury,Cougar,two.38        

Instance of an analogous European CSV/DSV file (where the decimal separator is a comma and the value separator is a semicolon):

Twelvemonth;Brand;Model;Length 1997;Ford;E350;two,35 2000;Mercury;Cougar;ii,38        

The latter format is non RFC 4180 compliant.^[21] Compliance could be accomplished by the employ of a comma instead of a semicolon as a separator and either the international annotation for the representation of the decimal mark or the practice of quoting all numbers that have a decimal marking.

Application support [edit]

Some applications use CSV every bit data interchange format to raise its interoperability, exporting and importing CSV. Others use CSV as internal format.

As data interchange format: the CSV file format is supported by almost all spreadsheets and database management systems,

• Spreadsheets including Apple Numbers, LibreOffice Calc, and Apache OpenOffice Calc. Microsoft Excel also supports CSV, simply with restrictions in comparison to other spreadsheet software (e.g., as of 2019^[update] Excel still cannot export CSV files in the commonly used UTF-8 character encoding).

• Relational databases, when using standard SQL, tin export/import CSV past the COPY command. For case on PostgreSQL is valid Re-create TO t 'file.csv' CSV and Re-create FROM t 'file.csv' CSV.^[22]

• Many utility programs on Unix-style systems (such as cut, paste, join, sort, uniq, awk) tin dissever files on a comma delimiter, and can therefore process simple CSV files. Still, this method does not correctly handle commas within quoted strings.

As (main or optional) internal representation. Tin can be native or foreign, only differ from interchange format ("export/import only") because information technology is non necessary to create a copy in some other format:

• Some Spreadsheets including LibreOffice Calc offers this option, without enforcing user to adopt another format.

• Some relational databases, when using standard SQL, offer strange-data wrapper (FDW). For example PostgreSQL offers the "CREATE Foreign TABLE"^[23] and "CREATE EXTENSION file_fdw^[24] to configure any variant of CSV.

• Databases like Apache Hive, offers the pick to express CSV or .csv.gz as internal table format.

• The emacs editor can operate on CSV files using csv-nav mode.^[25]

CSV format is supported by libraries available for many programming languages. Almost provide some way to specify the field delimiter, decimal separator, character encoding, quoting conventions, date format, etc.

Software and row limits [edit]

Each software that works with CSV has its limits on the maximum corporeality of rows CSV file can accept. Below is a listing of common software and its limitations:^[26]

• Microsoft Excel: 1,048,576 row limit;
• Apple tree Numbers: one,000,000 row limit;
• Google Sheets: five,000,000 cell limit (the product of columns and rows);
• OpenOffice and LibreOffice: one,048,576 row limit;
• Text Editors (such as WordPad, TextEdit, Vim etc.): no row or cell limit;
• Databases (Copy command and FDW): no row or cell limit.

See besides [edit]

• Tab-separated values
• Comparison of information-serialization formats
• Delimiter-separated values
• Delimiter collision
• Flat-file database
• Simple Data Format
• Substitute character, Nil grapheme, invisible comma U+2063

References [edit]

1. ^ ^{a b c d e} Shafranovich, Y. (October 2005). Common Format and MIME Type for CSV Files. IETF. p. 1. doi:10.17487/RFC4180. RFC 4180.
2. ^ IBM DB2 Administration Guide. IBM.
3. ^ "CSV - Comma Separated Values". Retrieved 2017-12-02 .
4. ^ "CSV Files". Retrieved June 4, 2014.
5. ^ "Comma Separated Values (CSV) Standard File Format". Edoceo, Inc. Retrieved June 4, 2014.
6. ^ IBM FORTRAN Program Products for Os and the CMS Component of VM/370 Full general Information (PDF) (first ed.), July 1972, p. 17, GC28-6884-0, retrieved Feb 5, 2016, For users familiar with the predecessor FORTRAN 4 Thousand and H processors, these are the major new linguistic communication capabilities
7. ^ "Listing-Directed I/O", Fortran 77 Language Reference, Oracle
8. ^ "SuperCalc², spreadsheet package for IBM, CP/Chiliad". Retrieved December 11, 2017.
9. ^ "Comma-Separated-Value Format File Construction". Retrieved December 11, 2017.
10. ^ "CSV, Comma Separated Values (RFC 4180)". Retrieved June 4, 2014.
11. ^ RFC 4180: Common Format and MIME Type for Comma-Separated Values (CSV) Files. doi:10.17487/RFC4180. RFC 4180. Retrieved Dec 22, 2020.
12. ^ See sparql11-results-csv-tsv, the first W3C recommendation scoped in CSV and filling some of RFC 4180's deficiencies.
13. ^ RFC 7111: URI Fragment Identifiers for the text/csv Media Blazon. doi:10.17487/RFC7111. RFC 7111. Retrieved December 22, 2020.
14. ^ "Model for Tabular Data and Metadata on the Web – W3C Recommendation 17 Dec 2015". Retrieved March 23, 2016.
15. ^ *Creativyst (2010), How To: The Comma Separated Value (CSV) File Format, creativyst.com, retrieved May 24, 2010
16. ^ "Tabular Data Package". Frictionless Data Specs.
17. ^ "CSV Dialect". Frictionless Information Specs.
18. ^ "CSV on the Web Working Group". W3C CSV WG. 2013. Retrieved 2015-04-22 .
19. ^ CSV on the Web Repository (on GitHub)
20. ^ Model for Tabular Data and Metadata on the Web (W3C Recommendation)
21. ^ Shafranovich (2005) states, "Inside the header and each record, there may be ane or more than fields, separated by commas."
22. ^ https://www.postgresql.org/docs/electric current/sql-copy.html
23. ^ https://www.postgresql.org/docs/current/postgres-fdw.html
24. ^ https://www.postgresql.org/docs/current/file-fdw.html
25. ^ "EmacsWiki: Csv Nav".
26. ^ "Understanding CSV and row limits". Retrieved Feb 28, 2021.

Farther reading [edit]

• "IBM DB2 Administration Guide - LOAD, IMPORT, and EXPORT File Formats". IBM. Archived from the original on 2016-12-thirteen. Retrieved 2016-12-12 . (Has file descriptions of delimited ASCII (.DEL) (including comma- and semicolon-separated) and non-delimited ASCII (.ASC) files for data transfer.)

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Source: https://en.wikipedia.org/wiki/Comma-separated_values

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